Praseodymium in PDB 4flb: Cid of Human RPRD2

The structure of Cid of Human RPRD2, PDB code: 4flb was solved by Z.Ni, C.Xu, W.Tempel, M.El Bakkouri, P.Loppnau, X.Guo, C.Bountra, C.H.Arrowsmith, A.M.Edwards, J.Min, J.F.Greenblatt, Structural Genomicsconsortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	28.54 / 1.80
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	40.339, 40.339, 145.750, 90.00, 90.00, 90.00
R / Rfree (%)	17.5 / 21.6

The binding sites of Praseodymium atom in the Cid of Human RPRD2 (pdb code 4flb). This binding sites where shown within 5.0 Angstroms radius around Praseodymium atom.
In total 2 binding sites of Praseodymium where determined in the Cid of Human RPRD2, PDB code: 4flb:
Jump to Praseodymium binding site number: 1; 2;

Praseodymium binding site 1 out of 2 in the Cid of Human RPRD2


Mono view


Stereo pair view

A full contact list of Praseodymium with other atoms in the Pr binding site number 1 of Cid of Human RPRD2 within 5.0Å range: probe atom residue distance (Å) B Occ A:Pr203 b:25.5 occ:0.40 OD2 A:ASP28 2.3 26.3 1.0 OE1 A:GLU24 2.6 45.2 1.0 OE2 A:GLU24 2.8 43.8 1.0 CD A:GLU24 3.1 40.4 1.0 CG A:ASP28 3.5 24.7 1.0 CB A:ASP28 4.2 23.0 1.0 OD1 A:ASP28 4.5 24.5 1.0 CG A:GLU24 4.6 33.8 1.0 PR A:PR204 4.9 48.3 0.3

Praseodymium binding site 2 out of 2 in the Cid of Human RPRD2


Mono view


Stereo pair view

A full contact list of Praseodymium with other atoms in the Pr binding site number 2 of Cid of Human RPRD2 within 5.0Å range: probe atom residue distance (Å) B Occ A:Pr204 b:48.3 occ:0.30 OE2 A:GLU24 2.9 43.8 1.0 CD A:GLU24 4.0 40.4 1.0 NZ A:LYS64 4.1 30.2 1.0 CG A:GLU24 4.5 33.8 1.0 CD A:LYS64 4.8 26.0 1.0 PR A:PR203 4.9 25.5 0.4 OE1 A:GLU24 5.0 45.2 1.0

Z.Ni, C.Xu, X.Guo, G.O.Hunter, O.V.Kuznetsova, W.Tempel, E.Marcon, G.Zhong, H.Guo, W.H.Kuo, J.Li, P.Young, J.B.Olsen, C.Wan, P.Loppnau, M.El Bakkouri, G.A.Senisterra, H.He, H.Huang, S.S.Sidhu, A.Emili, S.Murphy, A.L.Mosley, C.H.Arrowsmith, J.Min, J.F.Greenblatt. RPRD1A and RPRD1B Are Human Rna Polymerase II C-Terminal Domain Scaffolds For SER5 Dephosphorylation. Nat.Struct.Mol.Biol. V. 21 686 2014.
ISSN: ISSN 1545-9993
PubMed: 24997600
DOI: 10.1038/NSMB.2853