Praseodymium in PDB 6oom: Protein A

The structure of Protein A, PDB code: 6oom was solved by M.Lu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	15.00 / 2.20
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	95.239, 63.031, 102.340, 90.00, 101.28, 90.00
R / Rfree (%)	n/a / n/a

The binding sites of Praseodymium atom in the Protein A (pdb code 6oom). This binding sites where shown within 5.0 Angstroms radius around Praseodymium atom.
In total 2 binding sites of Praseodymium where determined in the Protein A, PDB code: 6oom:
Jump to Praseodymium binding site number: 1; 2;

Praseodymium binding site 1 out of 2 in the Protein A


Mono view


Stereo pair view

A full contact list of Praseodymium with other atoms in the Pr binding site number 1 of Protein A within 5.0Å range: probe atom residue distance (Å) B Occ A:Pr503 b:82.8 occ:1.00 OD2 A:ASP211 2.5 64.3 1.0 OE2 A:GLU207 2.6 82.2 1.0 CG A:ASP211 3.3 61.9 1.0 OD1 A:ASP211 3.3 63.5 1.0 CD A:GLU207 3.6 79.2 1.0 OE1 A:GLU207 3.8 81.5 1.0 PR A:PR504 4.3 96.5 1.0 CB A:ASP211 4.6 59.9 1.0 CG A:GLU207 4.9 78.2 1.0 O A:GLU207 5.0 68.1 1.0

Praseodymium binding site 2 out of 2 in the Protein A


Mono view


Stereo pair view

A full contact list of Praseodymium with other atoms in the Pr binding site number 2 of Protein A within 5.0Å range: probe atom residue distance (Å) B Occ A:Pr504 b:96.5 occ:1.00 OE2 A:GLU207 3.0 82.2 1.0 CD A:GLU207 3.7 79.2 1.0 CG A:GLU207 3.7 78.2 1.0 OD1 A:ASP211 4.2 63.5 1.0 PR A:PR503 4.3 82.8 1.0 OE1 A:GLU207 4.8 81.5 1.0

H.H.Wu, J.Symersky, M.Lu. Structure of An Engineered Multidrug Transporter Mdfa Reveals the Molecular Basis For Substrate Recognition. Commun Biol V. 2 210 2019.
ISSN: ESSN 2399-3642
PubMed: 31240248
DOI: 10.1038/S42003-019-0446-Y