Praseodymium in PDB 6vs2: Protein D

The structure of Protein D, PDB code: 6vs2 was solved by M.Lu, M.M.Lu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	15.00 / 3.00
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	95.014, 66.973, 110.433, 90.00, 111.10, 90.00
R / Rfree (%)	28 / 29.9

The binding sites of Praseodymium atom in the Protein D (pdb code 6vs2). This binding sites where shown within 5.0 Angstroms radius around Praseodymium atom.
In total only one binding site of Praseodymium was determined in the Protein D, PDB code: 6vs2:

Praseodymium binding site 1 out of 1 in the Protein D


Mono view


Stereo pair view

A full contact list of Praseodymium with other atoms in the Pr binding site number 1 of Protein D within 5.0Å range: probe atom residue distance (Å) B Occ A:Pr502 b:0.4 occ:0.00 OD1 A:ASP211 3.3 0.2 1.0 OE2 A:GLU207 3.6 0.4 1.0 CD A:GLU207 3.6 0.1 1.0 CG A:GLU207 3.8 0.6 1.0 CG A:ASP211 4.1 0.8 1.0 OE1 A:GLU207 4.1 0.9 1.0 CB A:ASP211 4.5 0.0 1.0 O A:GLU207 4.8 0.2 1.0 CB A:GLU207 4.9 0.5 1.0

H.H.Wu, J.Symersky, M.Lu. Structure and Mechanism of A Redesigned Multidrug Transporter From the Major Facilitator Superfamily. Sci Rep V. 10 3949 2020.
ISSN: ESSN 2045-2322
PubMed: 32127561
DOI: 10.1038/S41598-020-60332-8