Atomistry » Praseodymium » PDB 6vs0-7bxf » 6vs2
Atomistry »
  Praseodymium »
    PDB 6vs0-7bxf »
      6vs2 »

Praseodymium in PDB 6vs2: Protein D

Protein crystallography data

The structure of Protein D, PDB code: 6vs2 was solved by M.Lu, M.M.Lu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 15.00 / 3.00
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 95.014, 66.973, 110.433, 90.00, 111.10, 90.00
R / Rfree (%) 28 / 29.9

Praseodymium Binding Sites:

The binding sites of Praseodymium atom in the Protein D (pdb code 6vs2). This binding sites where shown within 5.0 Angstroms radius around Praseodymium atom.
In total only one binding site of Praseodymium was determined in the Protein D, PDB code: 6vs2:

Praseodymium binding site 1 out of 1 in 6vs2

Go back to Praseodymium Binding Sites List in 6vs2
Praseodymium binding site 1 out of 1 in the Protein D


Mono view


Stereo pair view

A full contact list of Praseodymium with other atoms in the Pr binding site number 1 of Protein D within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Pr502

b:0.4
occ:0.00
OD1 A:ASP211 3.3 0.2 1.0
OE2 A:GLU207 3.6 0.4 1.0
CD A:GLU207 3.6 0.1 1.0
CG A:GLU207 3.8 0.6 1.0
CG A:ASP211 4.1 0.8 1.0
OE1 A:GLU207 4.1 0.9 1.0
CB A:ASP211 4.5 0.0 1.0
O A:GLU207 4.8 0.2 1.0
CB A:GLU207 4.9 0.5 1.0

Reference:

H.H.Wu, J.Symersky, M.Lu. Structure and Mechanism of A Redesigned Multidrug Transporter From the Major Facilitator Superfamily. Sci Rep V. 10 3949 2020.
ISSN: ESSN 2045-2322
PubMed: 32127561
DOI: 10.1038/S41598-020-60332-8
Page generated: Thu Oct 29 06:39:40 2020

Last articles

Xe in 6AYK
Xe in 6QII
Xe in 6ASM
Xe in 5NSW
Xe in 6FY9
Xe in 5O1K
Xe in 5O27
Xe in 5M69
Xe in 5KPU
Xe in 5I63
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy